Found this on page 5 of the above pdf
We need the year / model of your car.
Basically, if you still have a ballast resistor, you must run an additional wire from IGN2 on the ignition switch to the coil+ side of the ballast.
If you are NOT going to run a ballast type ignition, jumper IGN1 and IGN2 together at the switch.
Below, picking out of the sky, is '71 wiring
So regardless of which terminals you use for what in the GM connector, you need Mopar J1-12R (RED) hooked to the AutoWire RED (Bat)
S2-18Y (YELLOW) hooked to the AW VIOLET (start)
Q2-12BK (BLACK hooked to the AW BROWN (ACC)
J2-16DBL (DarkBLue) hooked to the AW PINK (IGN run)
J3-14BR (BROWN) either run a wire to coil+ for ballast bypass or jumper to J2 if no ballast used
J1-12R (RED) hooked to AW RED (BAT)