Heads may not flow well...seen this with other "ported" indy heads. You must me using an adapter on the indy intake...I cnc the opening and port the plenum so you can mount the 1050 on the flange with no spacer.
Cam is small and way too conservative. Headers are small but can make 600HP. Are your pistons dish? Chamber volume? Rockers and ratio? Did you line hone the block with the girdle?
Brian