repo sill plates install, need help!

I used my dremel to shave down both the ends on the repo sills I bought earlier this year. I didn't shave them completly off but enough for them to sit flush against the sill metal. I also shaved down the part that pinches the carpet against the windlances.

That's what I thought I needed to do, it just didn't look right the way it came.

Thanks, Dan