Charging issues?

I don't believe it matters. The factory colors are blue --hooks in with "ignition run" and the green goes back to the regulator. The other terminal of the regulator also goes to "ignition run."

the basic diagram from MyMopar, but incorrectly called "dual field." "Isolated field" is the correct term

http://www.mymopar.com/downloads/Dual_Field_Alternator_Wiring.jpg

from here

http://www.mymopar.com/index.php?pid=18