Taking on water in the interior

Thanks for the advice. Are the drain holes in front of the hood hinge? (as in between the hinge and the body) I just went out a looked and seen 3 holes on each side with leaves in them. found this thread too: http://www.forabodiesonly.com/mopar/showthread.php?t=233090

I have the wiper seal kit from schumacher. I got a bunch of wiper parts that I need to install and will put the seals on when I get to those. Do you think I could clean up the rust with the new windshield in? cause I don't think I'll be able to take the windshield out myself. I know it would be best to take it out first cause I have no idea what the rust looks like under the rubber and if the new one will even be able to go in. I wonder if I put some sealer where the trim goes after the windshields in, if that would be good enough.