The long shackles tend to force Mopar leaf springs to sag past horizontal. This is likely due to the location of the strength on Mopar springs (forward of the axle). This puts a slight "S" curve on the spring.
My daughter-in-law's '65 Mustang has long shackles on it (my son put them on the shortest hole, though). Because Mustang springs are symmetrical they don't sag the same way and tall shackles will tend to raise the back end more.