408 stroker header size

I' just worried when the motor torques it might rub so that's enough clearance ?mounts are in good shape

Use a combo of thick (truck) and thin (car) isolator pads. Loosen up the stearing box and motor mounts and move everything around until you get a good fit.
I have Dougs on my 68 Fastback and they fit great!
You can get the isolators at local parts store.