Does this look right to you?? Front suspension

There is so much there that doesn't look right.

First photo... The nut looks like it is not in full contact with the flat washer.

The second photo... The arm looks like it should have an angle at the upper ball joint

The third photo... I agree it would be nice if there was a positive seal to the boot and the arm.

If you don't have the shocks installed, you might have the arm at an angle it would not ever be in. ( As gdrill said) with weight on it, it will fit much differently.