Does this look right to you?? Front suspension

There is so much there that doesn't look right.

First photo... The nut looks like it is not in full contact with the flat washer.

The second photo... The arm looks like it should have an angle at the upper ball joint

The third photo... I agree it would be nice if there was a positive seal to the boot and the arm.

If you don't have the shocks installed, you might have the arm at an angle it would not ever be in. ( As gdrill said) with weight on it, it will fit much differently.
so what I should take it off and install it on ride height? that first photo was an example the other side it touches the bolt so I took the caliper off to take the pic. but the third dan told me it would be flush on the upper control arm but its not I will put on the wheels and drop the car tomorrow and post more pics