Normal for Water Pump Housings?

Definitely not a stain. Looks to like it was strategically placed to fill some pitting. Brake cleaner did nothing, but I was able to scrape it off exposing the pitting.
View attachment 1715873059
There are some very deep pin holes here and there in other places.

How about the slag? Leave it or try to get something in there to grind it down.
Looks to me the manufacturer used an epoxy material to fill in porosity left from the casting process. And they did a really poor job of it. Back in my manufacturing-foundry days we used a product called Devcon, there was a limit on the depth, the size and the number of porosity pin holes per sq inch. From the photos that part exceeds what we would repair due to the size of the defects.
I would be on the phone with Mancini telling them the new part they shipped has porosity and that it needs to be exchanged.