Old school aligners made you hang the suspension to measure SAI. New machines, not so much. Hell these new machines you don't even have to jack the car up to measure wheel runout compensation. A true alignment should include a good "shake down" of steering components. It seems this may have been over looked in the OP's alignment.
There was no mention of a shakedown. And this shop was tough to find every other shop said their machine won’t work on the car because of the rear wheels tucked under the quarters.